Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-mannosidase, putative | SAMN04488101_105233 | Not Available | Positive | 2973865 - 2976045 | 82495.0 |
| alpha-glucosidase | SAMN04488101_105234 | Not Available | Positive | 2976073 - 2978019 | 73379.8 |
| transposase dde domain-containing protein | SAMN04488101_105235 | Not Available | Negative | 2978257 - 2978652 | 15096.4 |
| dna-binding transcriptional regulator, laci/purr family | SAMN04488101_105236 | Not Available | Positive | 2979083 - 2980900 | 68568.9 |
| hypothetical protein | SAMN04488101_105237 | Not Available | Positive | 2981133 - 2981645 | 19516.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_105238 | Not Available | Positive | 2981772 - 2982377 | 23489.4 |
| fecr family protein | SAMN04488101_105239 | Not Available | Positive | 2982467 - 2983639 | 43841.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_105240 | Not Available | Positive | 2983795 - 2987220 | 128112.0 |
| starch-binding associating with outer membrane | SAMN04488101_105241 | Not Available | Positive | 2987247 - 2989046 | 67869.7 |
| beta-galactosidase | SAMN04488101_105242 | Not Available | Positive | 2989293 - 2991824 | 94384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
