Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subcomplex epsilon subunit | SAMN04488101_105213 | Not Available | Negative | 2944263 - 2944505 | 8486.49 |
| atp synthase f1 subcomplex beta subunit | SAMN04488101_105214 | Not Available | Negative | 2944621 - 2946123 | 54235.1 |
| dtdp-4-dehydrorhamnose reductase | SAMN04488101_105215 | Not Available | Positive | 2946343 - 2947254 | 33792.4 |
| peroxiredoxin | SAMN04488101_105216 | Not Available | Positive | 2947577 - 2948041 | 17211.4 |
| Trna-arg | Not Available | Not Available | Positive | 2948141 - 2948214 | Not Available |
| hypothetical protein | SAMN04488101_105218 | Not Available | Negative | 2948204 - 2948410 | 8026.65 |
| transcriptional regulator, gntr family | SAMN04488101_105219 | Not Available | Negative | 2948573 - 2949595 | 38912.0 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN04488101_105220 | Not Available | Positive | 2949792 - 2950601 | 29166.6 |
| glucose/galactose transporter | SAMN04488101_105221 | Not Available | Positive | 2950612 - 2951874 | 46057.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_105222 | Not Available | Positive | 2952033 - 2952629 | 22821.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
