Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04488101_105203 | Not Available | Negative | 2932312 - 2933727 | 50598.6 |
| 2-isopropylmalate synthase | SAMN04488101_105204 | Not Available | Negative | 2933767 - 2934930 | 42524.8 |
| molybdate transport system atp-binding protein | SAMN04488101_105205 | Not Available | Negative | 2934943 - 2936436 | 55957.4 |
| ketol-acid reductoisomerase | SAMN04488101_105206 | Not Available | Negative | 2936494 - 2937975 | 54022.0 |
| dinb superfamily protein | SAMN04488101_105207 | Not Available | Negative | 2938010 - 2938504 | 18922.6 |
| acetolactate synthase, small subunit | SAMN04488101_105208 | Not Available | Negative | 2938488 - 2939099 | 23814.5 |
| acetolactate synthase, large subunit | SAMN04488101_105209 | Not Available | Negative | 2939109 - 2940848 | 63324.1 |
| dihydroxyacid dehydratase | SAMN04488101_105210 | Not Available | Negative | 2940885 - 2942582 | 59875.0 |
| branched-chain amino acid aminotransferase | SAMN04488101_105211 | Not Available | Negative | 2942620 - 2943510 | 33404.1 |
| hypothetical protein | SAMN04488101_105212 | Not Available | Positive | 2943837 - 2944052 | 8585.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
