Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylbilane synthase | SAMN04488101_105183 | Not Available | Positive | 2911619 - 2913199 | 58822.7 |
| porphobilinogen synthase | SAMN04488101_105184 | Not Available | Positive | 2913302 - 2914270 | 35801.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04488101_105185 | Not Available | Positive | 2914319 - 2915692 | 49898.8 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488101_105186 | Not Available | Positive | 2915728 - 2916594 | 32453.7 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN04488101_105187 | Not Available | Positive | 2916597 - 2917301 | 27368.4 |
| hypothetical protein | SAMN04488101_105188 | Not Available | Positive | 2917301 - 2917816 | 19628.9 |
| uroporphyrinogen decarboxylase | SAMN04488101_105189 | Not Available | Positive | 2917845 - 2918867 | 37998.3 |
| putative membrane protein | SAMN04488101_105190 | Not Available | Positive | 2918873 - 2919421 | 21313.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_105191 | Not Available | Positive | 2919542 - 2920108 | 21474.0 |
| hypothetical protein | SAMN04488101_105192 | Not Available | Positive | 2920098 - 2920769 | 25026.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
