Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | SAMN04488101_105173 | Not Available | Positive | 2901902 - 2902834 | 33389.9 |
| inosine-uridine nucleoside n-ribohydrolase | SAMN04488101_105174 | Not Available | Positive | 2902824 - 2903846 | 38552.5 |
| sialate o-acetylesterase | SAMN04488101_105175 | Not Available | Positive | 2903873 - 2905294 | 52840.2 |
| repeat domain-containing protein | SAMN04488101_105176 | Not Available | Positive | 2905446 - 2907446 | 73911.6 |
| dipeptidyl peptidase iv (dpp iv) n-terminal region | SAMN04488101_105177 | Not Available | Positive | 2907446 - 2908723 | 46959.0 |
| sialate o-acetylesterase | SAMN04488101_105178 | Not Available | Positive | 2908795 - 2908974 | 6712.06 |
| hypothetical protein | SAMN04488101_105179 | Not Available | Positive | 2909196 - 2909360 | 5928.52 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488101_105180 | Not Available | Negative | 2909370 - 2910194 | 30454.9 |
| hypothetical protein | SAMN04488101_105181 | Not Available | Positive | 2910245 - 2910379 | 5077.24 |
| glutamyl-trna reductase | SAMN04488101_105182 | Not Available | Positive | 2910367 - 2911593 | 46630.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
