Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04488101_105153 | Not Available | Positive | 2874525 - 2875115 | 22583.5 |
| hypothetical protein | SAMN04488101_105154 | Not Available | Positive | 2875127 - 2875351 | 8695.58 |
| predicted arabinose efflux permease, mfs family | SAMN04488101_105155 | Not Available | Positive | 2875388 - 2876635 | 45343.6 |
| arac-type dna-binding protein | SAMN04488101_105156 | Not Available | Negative | 2876637 - 2877506 | 33575.5 |
| hypothetical protein | SAMN04488101_105157 | Not Available | Positive | 2877778 - 2879412 | 61065.5 |
| l-ribulokinase | SAMN04488101_105158 | Not Available | Positive | 2879420 - 2881108 | 61754.8 |
| 2-dehydro-3-deoxy-d-arabinonate dehydratase | SAMN04488101_105159 | Not Available | Positive | 2881117 - 2881968 | 31935.9 |
| nadp-dependent aldehyde dehydrogenase | SAMN04488101_105160 | Not Available | Positive | 2881968 - 2883554 | 55774.6 |
| altronate hydrolase | SAMN04488101_105161 | Not Available | Positive | 2883558 - 2885228 | 60802.8 |
| solute:na+ symporter, sss family | SAMN04488101_105162 | Not Available | Positive | 2885364 - 2886953 | 58032.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
