Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_105143 | Not Available | Negative | 2864156 - 2865211 | 39420.2 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04488101_105144 | Not Available | Negative | 2865616 - 2866497 | 33413.0 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488101_105145 | Not Available | Negative | 2866511 - 2867263 | 28114.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488101_105146 | Not Available | Negative | 2867260 - 2867994 | 26183.8 |
| short-chain dehydrogenase | SAMN04488101_105147 | Not Available | Positive | 2868109 - 2868798 | 25067.2 |
| phage shock protein c (pspc) family protein | SAMN04488101_105148 | Not Available | Positive | 2868819 - 2869541 | 26910.9 |
| hypothetical protein | SAMN04488101_105149 | Not Available | Positive | 2869544 - 2870485 | 34933.8 |
| uncharacterized membrane protein yckc, rdd family | SAMN04488101_105150 | Not Available | Positive | 2870486 - 2871109 | 23516.2 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04488101_105151 | Not Available | Positive | 2871139 - 2873145 | 74663.6 |
| hypothetical protein | SAMN04488101_105152 | Not Available | Negative | 2873317 - 2874426 | 41990.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
