Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | SAMN04488101_105113 | Not Available | Negative | 2822641 - 2823147 | 17220.2 |
| atp-dependent rna helicase rhle | SAMN04488101_105114 | Not Available | Negative | 2823599 - 2824906 | 47977.5 |
| topoisomerase-4 subunit b | SAMN04488101_105115 | Not Available | Positive | 2825095 - 2826996 | 72029.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488101_105116 | Not Available | Positive | 2827121 - 2829235 | 79914.1 |
| membrane protein | SAMN04488101_105117 | Not Available | Negative | 2829236 - 2830264 | 36889.0 |
| outer membrane protein assembly factor bama | SAMN04488101_105118 | Not Available | Negative | 2830266 - 2832611 | 87927.7 |
| family of unknown function | SAMN04488101_105119 | Not Available | Negative | 2832595 - 2837679 | 187910.0 |
| topoisomerase-4 subunit a | SAMN04488101_105120 | Not Available | Positive | 2837938 - 2841117 | 118653.0 |
| nadh dehydrogenase subunit n | SAMN04488101_105121 | Not Available | Negative | 2841164 - 2842603 | 52972.8 |
| nadh dehydrogenase subunit m | SAMN04488101_105122 | Not Available | Negative | 2842608 - 2844107 | 56151.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
