Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488101_10583 | Not Available | Positive | 2794564 - 2795808 | 45303.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10584 | Not Available | Positive | 2795811 - 2799098 | 123114.0 |
| susd family protein | SAMN04488101_10585 | Not Available | Positive | 2799107 - 2800483 | 52394.7 |
| hypothetical protein | SAMN04488101_10586 | Not Available | Negative | 2800526 - 2800834 | 10920.5 |
| methylamine utilisation protein maue | SAMN04488101_10587 | Not Available | Negative | 2800836 - 2801324 | 18230.1 |
| acetyl-coenzyme a synthetase | SAMN04488101_10588 | Not Available | Positive | 2801665 - 2803563 | 70705.9 |
| hypothetical protein | SAMN04488101_10589 | Not Available | Positive | 2804465 - 2804869 | 15671.7 |
| predicted zn-dependent peptidase | SAMN04488101_10590 | Not Available | Negative | 2805042 - 2807975 | 109938.0 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN04488101_10591 | Not Available | Positive | 2808193 - 2809041 | 30783.7 |
| hypothetical protein | SAMN04488101_10592 | Not Available | Positive | 2809046 - 2809324 | 10405.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
