Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_10573 | Not Available | Positive | 2785612 - 2786223 | 22703.6 |
| dihydrodipicolinate reductase | SAMN04488101_10574 | Not Available | Positive | 2786288 - 2787028 | 27499.8 |
| signal peptidase i | SAMN04488101_10575 | Not Available | Positive | 2787034 - 2788233 | 46020.1 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN04488101_10576 | Not Available | Negative | 2788230 - 2789315 | 38840.5 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN04488101_10577 | Not Available | Negative | 2789321 - 2790907 | 60622.5 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN04488101_10578 | Not Available | Negative | 2790954 - 2792288 | 50484.4 |
| fused signal recognition particle receptor | SAMN04488101_10579 | Not Available | Negative | 2792335 - 2793297 | 34874.0 |
| protein of unknown function | SAMN04488101_10580 | Not Available | Negative | 2793370 - 2793528 | 5697.95 |
| large subunit ribosomal protein l33 | SAMN04488101_10581 | Not Available | Negative | 2793569 - 2793751 | 6984.71 |
| lsu ribosomal protein l28p | SAMN04488101_10582 | Not Available | Negative | 2793793 - 2794026 | 8872.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
