Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488101_10563 | Not Available | Positive | 2771796 - 2773004 | 44197.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10564 | Not Available | Positive | 2773262 - 2776828 | 132513.0 |
| susd family protein | SAMN04488101_10565 | Not Available | Positive | 2776839 - 2778284 | 54111.1 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN04488101_10566 | Not Available | Positive | 2778303 - 2779613 | 47764.8 |
| protein of unknown function | SAMN04488101_10567 | Not Available | Positive | 2779621 - 2780952 | 47797.2 |
| peptide/nickel transport system substrate-binding protein | SAMN04488101_10568 | Not Available | Negative | 2781049 - 2782581 | 58396.9 |
| iron complex transport system substrate-binding protein | SAMN04488101_10569 | Not Available | Positive | 2782726 - 2783184 | 17163.7 |
| nad(p)h-dependent fmn reductase | SAMN04488101_10570 | Not Available | Negative | 2783171 - 2783692 | 19472.4 |
| chromosome segregation atpase | SAMN04488101_10571 | Not Available | Positive | 2783875 - 2784678 | 29618.0 |
| chromosome partitioning protein, parb family | SAMN04488101_10572 | Not Available | Positive | 2784689 - 2785612 | 34764.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
