Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_10543 | Not Available | Negative | 2741160 - 2741384 | 8285.51 |
| cell division transport system permease protein | SAMN04488101_10544 | Not Available | Negative | 2741384 - 2742262 | 32521.6 |
| hypothetical protein | SAMN04488101_10545 | Not Available | Positive | 2742553 - 2743065 | 19059.2 |
| h+/cl-antiporter clca | SAMN04488101_10546 | Not Available | Positive | 2743147 - 2744403 | 44929.0 |
| leucyl-trna synthetase | SAMN04488101_10547 | Not Available | Positive | 2744684 - 2747491 | 107308.0 |
| hypothetical protein | SAMN04488101_10548 | Not Available | Positive | 2748476 - 2748760 | 11308.4 |
| hypothetical protein | SAMN04488101_10549 | Not Available | Negative | 2748884 - 2750071 | 45999.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_10550 | Not Available | Positive | 2750530 - 2751129 | 23683.4 |
| fecr family protein | SAMN04488101_10551 | Not Available | Positive | 2751202 - 2752254 | 39426.4 |
| tonb-dependent receptor | SAMN04488101_10552 | Not Available | Positive | 2752458 - 2755955 | 129058.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
