Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_10533 | Not Available | Negative | 2730412 - 2730597 | 7150.4 |
| rna polymerase, sigma subunit, ecf family | SAMN04488101_10534 | Not Available | Negative | 2730731 - 2731306 | 22529.3 |
| excinuclease abc subunit a | SAMN04488101_10535 | Not Available | Positive | 2731572 - 2734379 | 104515.0 |
| hypothetical protein | SAMN04488101_10536 | Not Available | Positive | 2734420 - 2735040 | 23406.3 |
| transporter, cpa2 family | SAMN04488101_10537 | Not Available | Negative | 2735112 - 2737343 | 81747.4 |
| hypothetical protein | SAMN04488101_10538 | Not Available | Negative | 2737404 - 2737766 | 14176.3 |
| riboflavin kinase / fmn adenylyltransferase | SAMN04488101_10539 | Not Available | Negative | 2737825 - 2738760 | 34940.3 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN04488101_10540 | Not Available | Negative | 2738765 - 2739628 | 31120.2 |
| trna pseudouridine synthase b | SAMN04488101_10541 | Not Available | Negative | 2739631 - 2740356 | 27031.4 |
| undecaprenyl-diphosphatase | SAMN04488101_10542 | Not Available | Negative | 2740356 - 2741150 | 29297.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
