Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10513 | Not Available | Positive | 2699530 - 2702982 | 127152.0 |
| starch-binding associating with outer membrane | SAMN04488101_10514 | Not Available | Positive | 2702995 - 2704467 | 55143.7 |
| calcineurin-like phosphoesterase | SAMN04488101_10515 | Not Available | Positive | 2704491 - 2705777 | 48786.6 |
| hypothetical protein | SAMN04488101_10516 | Not Available | Positive | 2706279 - 2707721 | 52345.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_10517 | Not Available | Positive | 2708064 - 2708636 | 22647.6 |
| fecr family protein | SAMN04488101_10518 | Not Available | Positive | 2708752 - 2709807 | 39911.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10519 | Not Available | Positive | 2709844 - 2713323 | 129689.0 |
| starch-binding associating with outer membrane | SAMN04488101_10520 | Not Available | Positive | 2713334 - 2715271 | 73258.0 |
| protein of unknown function | SAMN04488101_10521 | Not Available | Positive | 2715293 - 2716492 | 44993.3 |
| protein of unknown function | SAMN04488101_10522 | Not Available | Positive | 2716508 - 2717704 | 44361.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
