Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_104232 | Not Available | Positive | 2670505 - 2671248 | 27448.2 |
| pkd-like family protein | SAMN04488101_104233 | Not Available | Positive | 2671270 - 2672784 | 56637.4 |
| protein of unknown function | SAMN04488101_104234 | Not Available | Positive | 2672858 - 2673982 | 41663.4 |
| peptidase s46 | SAMN04488101_104235 | Not Available | Positive | 2674031 - 2676175 | 80715.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_104236 | Not Available | Positive | 2676230 - 2677600 | 51260.6 |
| peroxiredoxin | SAMN04488101_104237 | Not Available | Positive | 2677597 - 2678949 | 51238.4 |
| pas domain s-box-containing protein | SAMN04488101_104238 | Not Available | Positive | 2678997 - 2681696 | 102681.0 |
| hypothetical protein | SAMN04488101_104239 | Not Available | Negative | 2681831 - 2682691 | 32599.7 |
| hypothetical protein | SAMN04488101_104240 | Not Available | Positive | 2683069 - 2683214 | 5739.25 |
| putative heme-binding domain-containing protein | SAMN04488101_1052 | Not Available | Negative | 2684101 - 2686707 | 94874.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
