Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_104222 | Not Available | Positive | 2652982 - 2655498 | 94112.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_104223 | Not Available | Positive | 2655588 - 2656988 | 53475.1 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_104224 | Not Available | Positive | 2656999 - 2658777 | 66899.0 |
| transcriptional regulator, arac family | SAMN04488101_104225 | Not Available | Negative | 2658903 - 2659838 | 36142.7 |
| tetratricopeptide repeat-containing protein | SAMN04488101_104226 | Not Available | Negative | 2660029 - 2661699 | 63996.5 |
| tetratricopeptide repeat-containing protein | SAMN04488101_104227 | Not Available | Negative | 2661789 - 2663570 | 68725.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_104228 | Not Available | Positive | 2663743 - 2664312 | 22363.9 |
| fecr family protein | SAMN04488101_104229 | Not Available | Positive | 2664378 - 2665562 | 44806.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_104230 | Not Available | Positive | 2665672 - 2669013 | 123972.0 |
| susd family protein | SAMN04488101_104231 | Not Available | Positive | 2669048 - 2670469 | 53604.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
