Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_104202 | Not Available | Positive | 2618946 - 2619728 | 29270.1 |
| pkd-like family protein | SAMN04488101_104203 | Not Available | Positive | 2619685 - 2621274 | 58955.3 |
| fecr family protein | SAMN04488101_104204 | Not Available | Positive | 2621399 - 2622577 | 43910.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_104205 | Not Available | Positive | 2622906 - 2626253 | 124171.0 |
| susd family protein | SAMN04488101_104206 | Not Available | Positive | 2626267 - 2627697 | 53850.4 |
| protein of unknown function | SAMN04488101_104207 | Not Available | Positive | 2627708 - 2628460 | 27905.0 |
| pkd-like family protein | SAMN04488101_104208 | Not Available | Positive | 2628494 - 2630044 | 58516.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_104209 | Not Available | Positive | 2630147 - 2631499 | 50623.1 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_104210 | Not Available | Positive | 2631512 - 2632858 | 51273.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_104211 | Not Available | Positive | 2632861 - 2634201 | 50594.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
