Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-alanine-dl-glutamate epimerase | SAMN04488101_104192 | Not Available | Positive | 2602421 - 2603593 | 44400.4 |
| solute:na+ symporter, sss family | SAMN04488101_104193 | Not Available | Positive | 2603606 - 2605165 | 57407.1 |
| l-rhamnose mutarotase | SAMN04488101_104194 | Not Available | Positive | 2605176 - 2605598 | 16159.6 |
| arac-type dna-binding protein | SAMN04488101_104195 | Not Available | Negative | 2605595 - 2606467 | 33648.5 |
| hypothetical protein | SAMN04488101_104196 | Not Available | Positive | 2606631 - 2609291 | 100409.0 |
| hypothetical protein | SAMN04488101_104197 | Not Available | Positive | 2609302 - 2611629 | 85732.2 |
| hypothetical protein | SAMN04488101_104198 | Not Available | Positive | 2611709 - 2612869 | 44032.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_104199 | Not Available | Positive | 2613014 - 2613598 | 22342.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_104200 | Not Available | Positive | 2614157 - 2617507 | 124957.0 |
| starch-binding associating with outer membrane | SAMN04488101_104201 | Not Available | Positive | 2617519 - 2618934 | 53127.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
