Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriophage abortive infection abih | SAMN04488101_101202 | Not Available | Positive | 209316 - 210452 | 44359.0 |
| hypothetical protein | SAMN04488101_101203 | Not Available | Negative | 210355 - 210966 | 22847.5 |
| esterase/lipase superfamily enzyme | SAMN04488101_101204 | Not Available | Negative | 211229 - 212704 | 56017.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101205 | Not Available | Positive | 212878 - 213534 | 25669.0 |
| hypothetical protein | SAMN04488101_101206 | Not Available | Positive | 213503 - 214105 | 22666.2 |
| hypothetical protein | SAMN04488101_101207 | Not Available | Positive | 214118 - 215137 | 40087.6 |
| hypothetical protein | SAMN04488101_101208 | Not Available | Positive | 215091 - 217469 | 90171.3 |
| hypothetical protein | SAMN04488101_101209 | Not Available | Positive | 217474 - 217917 | 17113.5 |
| hypothetical protein | SAMN04488101_101210 | Not Available | Positive | 217914 - 219068 | 44213.3 |
| helicase | SAMN04488101_101211 | Not Available | Negative | 219065 - 221176 | 79962.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
