Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_104182 | Not Available | Negative | 2583005 - 2583301 | 10901.4 |
| right handed beta helix region | SAMN04488101_104183 | Not Available | Positive | 2583393 - 2585222 | 68355.3 |
| glycosyl hydrolase family 65, n-terminal domain | SAMN04488101_104184 | Not Available | Positive | 2585239 - 2587464 | 83543.9 |
| hypothetical protein | SAMN04488101_104185 | Not Available | Positive | 2587534 - 2589708 | 82188.6 |
| hypothetical protein | SAMN04488101_104186 | Not Available | Positive | 2589713 - 2592253 | 96278.1 |
| melibiase | SAMN04488101_104187 | Not Available | Positive | 2592304 - 2594655 | 86538.2 |
| hexosaminidase | SAMN04488101_104188 | Not Available | Positive | 2594678 - 2597035 | 88019.5 |
| hypothetical protein | SAMN04488101_104189 | Not Available | Positive | 2597172 - 2599463 | 85546.8 |
| alpha-glucosidase | SAMN04488101_104190 | Not Available | Positive | 2599544 - 2601397 | 69057.2 |
| d-threo-aldose 1-dehydrogenase | SAMN04488101_104191 | Not Available | Positive | 2601475 - 2602437 | 35522.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
