Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_104172 | Not Available | Positive | 2567025 - 2568647 | 59339.1 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04488101_104173 | Not Available | Positive | 2568692 - 2570386 | 62154.7 |
| hypothetical protein | SAMN04488101_104174 | Not Available | Positive | 2570391 - 2571452 | 37871.3 |
| pkd repeat-containing protein | SAMN04488101_104175 | Not Available | Positive | 2571449 - 2572489 | 38299.4 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04488101_104176 | Not Available | Positive | 2572687 - 2575695 | 112884.0 |
| alpha-l-fucosidase 2 | SAMN04488101_104177 | Not Available | Negative | 2575769 - 2578192 | 89329.5 |
| fucose permease | SAMN04488101_104178 | Not Available | Negative | 2578189 - 2579481 | 46496.1 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488101_104179 | Not Available | Negative | 2579515 - 2581737 | 82449.0 |
| hypothetical protein | SAMN04488101_104180 | Not Available | Negative | 2581751 - 2582494 | 28100.6 |
| cytochrome c | SAMN04488101_104181 | Not Available | Negative | 2582502 - 2582900 | 14105.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
