Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488101_104162 | Not Available | Negative | 2548203 - 2549636 | 55171.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_104163 | Not Available | Negative | 2549651 - 2553124 | 129334.0 |
| fecr family protein | SAMN04488101_104164 | Not Available | Negative | 2553199 - 2554272 | 40521.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_104165 | Not Available | Positive | 2554849 - 2557761 | 108595.0 |
| starch-binding associating with outer membrane | SAMN04488101_104166 | Not Available | Positive | 2557782 - 2559287 | 56919.8 |
| fasciclin domain-containing protein | SAMN04488101_104167 | Not Available | Positive | 2559287 - 2560402 | 42395.8 |
| protein of unknown function | SAMN04488101_104168 | Not Available | Positive | 2560430 - 2561536 | 42249.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_104169 | Not Available | Positive | 2561555 - 2564689 | 115752.0 |
| starch-binding associating with outer membrane | SAMN04488101_104170 | Not Available | Positive | 2564701 - 2566248 | 58580.2 |
| fasciclin domain-containing protein | SAMN04488101_104171 | Not Available | Positive | 2566268 - 2566987 | 26626.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
