Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic/doc family protein | SAMN04488101_104142 | Not Available | Negative | 2523642 - 2524448 | 30687.9 |
| ph domain-containing protein | SAMN04488101_104143 | Not Available | Positive | 2524609 - 2524989 | 14074.0 |
| hypothetical protein | SAMN04488101_104144 | Not Available | Positive | 2524943 - 2525752 | 32047.5 |
| hypothetical protein | SAMN04488101_104145 | Not Available | Negative | 2525779 - 2525907 | 4801.74 |
| hypothetical protein | SAMN04488101_104146 | Not Available | Positive | 2525937 - 2527604 | 63154.6 |
| glycerol kinase | SAMN04488101_104147 | Not Available | Negative | 2527594 - 2529075 | 53850.2 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488101_104148 | Not Available | Negative | 2529075 - 2530049 | 33831.4 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN04488101_104149 | Not Available | Negative | 2530051 - 2531556 | 55328.9 |
| predicted lipoprotein | SAMN04488101_104150 | Not Available | Negative | 2531563 - 2532195 | 23600.8 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04488101_104151 | Not Available | Negative | 2532197 - 2533129 | 33695.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
