Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_104132 | Not Available | Positive | 2516049 - 2518061 | 76859.8 |
| Trna-ser | Not Available | Not Available | Positive | 2518132 - 2518218 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2518310 - 2518386 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2518438 - 2518511 | Not Available |
| transcriptional regulator, y4mf family | SAMN04488101_104136 | Not Available | Positive | 2518693 - 2518896 | 7618.4 |
| serine/threonine-protein kinase hipa | SAMN04488101_104137 | Not Available | Positive | 2518911 - 2519243 | 12511.1 |
| serine/threonine-protein kinase hipa | SAMN04488101_104138 | Not Available | Positive | 2519236 - 2520189 | 36092.6 |
| hypothetical protein | SAMN04488101_104139 | Not Available | Negative | 2520380 - 2522110 | 64600.5 |
| hypothetical protein | SAMN04488101_104140 | Not Available | Positive | 2522881 - 2523174 | 10843.2 |
| hypothetical protein | SAMN04488101_104141 | Not Available | Negative | 2523266 - 2523526 | 9991.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
