Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_104122 | Not Available | Negative | 2503598 - 2504581 | 35794.3 |
| prolyl-trna synthetase | SAMN04488101_104123 | Not Available | Positive | 2504686 - 2506158 | 55606.1 |
| cystathionine gamma-lyase | SAMN04488101_104124 | Not Available | Positive | 2506210 - 2507349 | 41869.4 |
| tigr02757 family protein | SAMN04488101_104125 | Not Available | Positive | 2507389 - 2508216 | 32227.6 |
| bacteriocin-protection, ydei or ompd-associated | SAMN04488101_104126 | Not Available | Positive | 2508525 - 2509034 | 19467.8 |
| dolichol-phosphate mannosyltransferase | SAMN04488101_104127 | Not Available | Negative | 2509035 - 2509775 | 28457.6 |
| proton-dependent oligopeptide transporter, pot family | SAMN04488101_104128 | Not Available | Negative | 2509868 - 2511364 | 55389.7 |
| proton-dependent oligopeptide transporter, pot family | SAMN04488101_104129 | Not Available | Negative | 2511449 - 2513221 | 65010.2 |
| hypothetical protein | SAMN04488101_104130 | Not Available | Negative | 2513496 - 2514398 | 34037.5 |
| acetyl-coa c-acetyltransferase | SAMN04488101_104131 | Not Available | Negative | 2514423 - 2515601 | 40596.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
