Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_104112 | Not Available | Positive | 2491903 - 2492481 | 22048.2 |
| dna mismatch repair protein muts2 | SAMN04488101_104113 | Not Available | Positive | 2492484 - 2494856 | 89680.8 |
| dehydrogenase, pqq-dependent, s-gdh family | SAMN04488101_104114 | Not Available | Positive | 2494927 - 2496030 | 40181.1 |
| 3-oxoacid coa-transferase subunit a | SAMN04488101_104115 | Not Available | Positive | 2496081 - 2496782 | 25291.5 |
| 3-oxoacid coa-transferase subunit b | SAMN04488101_104116 | Not Available | Positive | 2496800 - 2497456 | 23331.7 |
| uridine kinase | SAMN04488101_104117 | Not Available | Negative | 2497499 - 2498146 | 24986.8 |
| lysm repeat-containing protein | SAMN04488101_104118 | Not Available | Negative | 2498136 - 2499311 | 43223.0 |
| starvation-inducible dna-binding protein | SAMN04488101_104119 | Not Available | Positive | 2499557 - 2500036 | 18520.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN04488101_104120 | Not Available | Positive | 2500052 - 2501965 | 70940.3 |
| long-chain fatty acid transport protein | SAMN04488101_104121 | Not Available | Negative | 2502047 - 2503579 | 55806.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
