Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_104102 | Not Available | Negative | 2483182 - 2483394 | 7233.34 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488101_104103 | Not Available | Positive | 2483769 - 2484335 | 21826.0 |
| trypsin-like peptidase domain-containing protein | SAMN04488101_104104 | Not Available | Positive | 2484342 - 2485430 | 39842.5 |
| uncharacterized conserved protein yece, duf72 family | SAMN04488101_104105 | Not Available | Positive | 2485507 - 2486451 | 36417.5 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN04488101_104106 | Not Available | Positive | 2486525 - 2487160 | 23658.1 |
| rna cap guanine-n2 methyltransferase | SAMN04488101_104107 | Not Available | Negative | 2487316 - 2488500 | 44626.6 |
| aspartate kinase | SAMN04488101_104108 | Not Available | Negative | 2488508 - 2489827 | 50241.8 |
| protein of unknown function | SAMN04488101_104109 | Not Available | Negative | 2489853 - 2490656 | 30221.9 |
| l-amino acid n-acyltransferase ynca | SAMN04488101_104110 | Not Available | Negative | 2490685 - 2491149 | 17727.1 |
| hypothetical protein | SAMN04488101_104111 | Not Available | Negative | 2491156 - 2491848 | 25990.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
