Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_10482 | Not Available | Negative | 2459261 - 2460799 | 55468.6 |
| major facilitator superfamily protein | SAMN04488101_10483 | Not Available | Positive | 2461036 - 2462277 | 44535.6 |
| l-lactate dehydrogenase complex protein lldg | SAMN04488101_10484 | Not Available | Negative | 2462280 - 2462861 | 20939.1 |
| l-lactate dehydrogenase complex protein lldf | SAMN04488101_10485 | Not Available | Negative | 2462854 - 2464233 | 52074.5 |
| l-lactate dehydrogenase complex protein llde | SAMN04488101_10486 | Not Available | Negative | 2464264 - 2464998 | 27163.0 |
| transcriptional regulator, laci family | SAMN04488101_10487 | Not Available | Positive | 2465145 - 2466191 | 38697.4 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN04488101_10488 | Not Available | Positive | 2466245 - 2467087 | 31358.2 |
| protein of unknown function | SAMN04488101_10489 | Not Available | Positive | 2467191 - 2468315 | 41547.7 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN04488101_10490 | Not Available | Positive | 2468335 - 2469105 | 27547.0 |
| lysophospholipase l1 | SAMN04488101_10491 | Not Available | Positive | 2469191 - 2470291 | 40934.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
