Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN04488101_10462 | Not Available | Negative | 2435302 - 2436519 | 44197.6 |
| glutamine synthetase | SAMN04488101_10463 | Not Available | Negative | 2436571 - 2438757 | 81476.6 |
| hypothetical protein | SAMN04488101_10464 | Not Available | Negative | 2438958 - 2439863 | 35077.9 |
| predicted membrane protein | SAMN04488101_10465 | Not Available | Negative | 2439853 - 2442270 | 90457.8 |
| putative auto-transporter adhesin, head gin domain | SAMN04488101_10466 | Not Available | Negative | 2442360 - 2443091 | 25411.4 |
| hypothetical protein | SAMN04488101_10467 | Not Available | Negative | 2443180 - 2443422 | 9338.12 |
| phosphoribosylformylglycinamidine synthase | SAMN04488101_10468 | Not Available | Negative | 2443672 - 2447340 | 134193.0 |
| trna1val (adenine37-n6)-methyltransferase | SAMN04488101_10469 | Not Available | Positive | 2447507 - 2448211 | 26072.2 |
| hypothetical protein | SAMN04488101_10470 | Not Available | Positive | 2448218 - 2448709 | 18453.3 |
| fructose-1,6-bisphosphatase i | SAMN04488101_10471 | Not Available | Positive | 2448731 - 2449801 | 38670.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
