Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_10452 | Not Available | Positive | 2421469 - 2423613 | 80594.0 |
| hypothetical protein | SAMN04488101_10453 | Not Available | Positive | 2423690 - 2424859 | 42046.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10454 | Not Available | Positive | 2424895 - 2428128 | 120454.0 |
| starch-binding associating with outer membrane | SAMN04488101_10455 | Not Available | Positive | 2428159 - 2429928 | 67385.1 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488101_10456 | Not Available | Positive | 2429947 - 2430774 | 30317.4 |
| n-acylglucosamine 2-epimerase | SAMN04488101_10457 | Not Available | Positive | 2430798 - 2432000 | 46309.1 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488101_10458 | Not Available | Positive | 2432003 - 2433247 | 44936.8 |
| hypothetical protein | SAMN04488101_10459 | Not Available | Positive | 2433446 - 2433796 | 13710.2 |
| lactoylglutathione lyase | SAMN04488101_10460 | Not Available | Positive | 2433806 - 2434270 | 17633.0 |
| lysophospholipase l1 | SAMN04488101_10461 | Not Available | Positive | 2434315 - 2435280 | 36201.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
