Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488101_10442 | Not Available | Positive | 2408665 - 2410476 | 66520.0 |
| protein of unknown function | SAMN04488101_10443 | Not Available | Positive | 2410500 - 2411429 | 34569.9 |
| predicted acyltransferase | SAMN04488101_10444 | Not Available | Positive | 2411533 - 2412963 | 53185.9 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN04488101_10445 | Not Available | Positive | 2413000 - 2414304 | 48272.9 |
| lysophospholipase l1 | SAMN04488101_10446 | Not Available | Positive | 2414334 - 2415008 | 25338.1 |
| lysophospholipase l1 | SAMN04488101_10447 | Not Available | Positive | 2414998 - 2415702 | 26973.0 |
| protein of unknown function | SAMN04488101_10448 | Not Available | Positive | 2415699 - 2416631 | 36077.5 |
| n-acylglucosamine 2-epimerase | SAMN04488101_10449 | Not Available | Positive | 2416648 - 2417808 | 45335.9 |
| hypothetical protein | SAMN04488101_10450 | Not Available | Positive | 2417805 - 2418689 | 33478.9 |
| dipeptidyl-peptidase 7. serine peptidase. merops family s46 | SAMN04488101_10451 | Not Available | Positive | 2418792 - 2420954 | 80690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
