Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10432 | Not Available | Positive | 2391264 - 2394338 | 113035.0 |
| starch-binding associating with outer membrane | SAMN04488101_10433 | Not Available | Positive | 2394349 - 2396112 | 66085.3 |
| lysophospholipase l1 | SAMN04488101_10434 | Not Available | Positive | 2396143 - 2396913 | 28616.6 |
| s-formylglutathione hydrolase frmb | SAMN04488101_10435 | Not Available | Positive | 2397049 - 2397855 | 30297.6 |
| hypothetical protein | SAMN04488101_10436 | Not Available | Positive | 2397889 - 2399082 | 43250.5 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488101_10437 | Not Available | Negative | 2399083 - 2400303 | 44356.7 |
| hexosaminidase | SAMN04488101_10438 | Not Available | Positive | 2400447 - 2402336 | 70768.5 |
| predicted protein | SAMN04488101_10439 | Not Available | Positive | 2402430 - 2403500 | 37767.9 |
| fad dependent oxidoreductase | SAMN04488101_10440 | Not Available | Positive | 2403548 - 2405431 | 69555.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10441 | Not Available | Positive | 2405465 - 2408653 | 116853.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
