Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_10422 | Not Available | Positive | 2372756 - 2373544 | 27971.9 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488101_10423 | Not Available | Negative | 2373588 - 2374811 | 44668.2 |
| hypothetical protein | SAMN04488101_10424 | Not Available | Positive | 2375250 - 2377385 | 80665.4 |
| n-acylglucosamine 2-epimerase | SAMN04488101_10425 | Not Available | Positive | 2377395 - 2378591 | 46420.7 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488101_10426 | Not Available | Positive | 2378594 - 2379832 | 44393.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10427 | Not Available | Positive | 2379863 - 2382937 | 112362.0 |
| starch-binding associating with outer membrane | SAMN04488101_10428 | Not Available | Positive | 2382942 - 2384636 | 63052.5 |
| fad dependent oxidoreductase | SAMN04488101_10429 | Not Available | Positive | 2384661 - 2386373 | 63269.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10430 | Not Available | Positive | 2386536 - 2389532 | 109843.0 |
| starch-binding associating with outer membrane | SAMN04488101_10431 | Not Available | Positive | 2389544 - 2391244 | 64124.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
