Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family s41 | SAMN04488101_10412 | Not Available | Positive | 2360315 - 2361955 | 60002.1 |
| hypothetical protein | SAMN04488101_10413 | Not Available | Positive | 2362103 - 2362369 | 9866.87 |
| peptidase family m28 | SAMN04488101_10414 | Not Available | Negative | 2362373 - 2363329 | 36034.0 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04488101_10415 | Not Available | Negative | 2363405 - 2364853 | 53615.2 |
| rna polymerase primary sigma factor | SAMN04488101_10416 | Not Available | Negative | 2364984 - 2365844 | 32680.1 |
| hypothetical protein | SAMN04488101_10417 | Not Available | Negative | 2366225 - 2366554 | 11908.7 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488101_10418 | Not Available | Negative | 2366697 - 2367539 | 32168.5 |
| dihydrolipoamide dehydrogenase | SAMN04488101_10419 | Not Available | Negative | 2367735 - 2369123 | 48845.1 |
| hypothetical protein | SAMN04488101_10420 | Not Available | Positive | 2369321 - 2369479 | 6271.93 |
| tonb-dependent receptor plug domain | SAMN04488101_10421 | Not Available | Positive | 2369457 - 2372630 | 115937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
