Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain | SAMN04488101_1042 | Not Available | Negative | 2352649 - 2353374 | 25879.3 |
| succinyl-coa synthetase beta subunit | SAMN04488101_1043 | Not Available | Negative | 2353596 - 2354786 | 42606.3 |
| hypothetical protein | SAMN04488101_1044 | Not Available | Negative | 2354828 - 2355583 | 29747.9 |
| protein of unknown function | SAMN04488101_1045 | Not Available | Negative | 2355595 - 2357253 | 64097.6 |
| hypothetical protein | SAMN04488101_1046 | Not Available | Negative | 2357280 - 2357582 | 11201.5 |
| transcriptional regulator | SAMN04488101_1047 | Not Available | Negative | 2357637 - 2357933 | 11085.7 |
| hypothetical protein | SAMN04488101_1048 | Not Available | Negative | 2357933 - 2358562 | 23140.6 |
| lipoprotein-releasing system atp-binding protein | SAMN04488101_1049 | Not Available | Positive | 2358683 - 2359333 | 23551.6 |
| hypothetical protein | SAMN04488101_10410 | Not Available | Positive | 2359330 - 2359671 | 12488.9 |
| hypothetical protein | SAMN04488101_10411 | Not Available | Positive | 2359661 - 2360269 | 23678.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
