Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_103323 | Not Available | Positive | 2342539 - 2343114 | 21759.5 |
| methylmalonyl-coa mutase | SAMN04488101_103324 | Not Available | Positive | 2343117 - 2344664 | 57100.0 |
| chromosomal replication initiator protein dnaa | SAMN04488101_103325 | Not Available | Positive | 2344853 - 2346289 | 54128.5 |
| nudix domain-containing protein | SAMN04488101_103326 | Not Available | Negative | 2346360 - 2346908 | 20748.8 |
| uncharacterized protein | SAMN04488101_103327 | Not Available | Negative | 2346921 - 2347688 | 26269.8 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN04488101_103328 | Not Available | Negative | 2347692 - 2348189 | 18247.7 |
| lema protein | SAMN04488101_103329 | Not Available | Negative | 2348219 - 2348800 | 21306.7 |
| hypothetical protein | SAMN04488101_103330 | Not Available | Positive | 2348983 - 2350524 | 55876.5 |
| hypothetical protein | SAMN04488101_103331 | Not Available | Positive | 2350643 - 2351002 | 13239.1 |
| transposase | SAMN04488101_1041 | Not Available | Positive | 2351548 - 2352612 | 40362.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
