Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04488101_103313 | Not Available | Positive | 2332589 - 2333443 | 32226.3 |
| ferrochelatase | SAMN04488101_103314 | Not Available | Positive | 2333517 - 2334530 | 38134.0 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04488101_103315 | Not Available | Negative | 2334527 - 2335750 | 46413.2 |
| udp-glucose dehydrogenase | SAMN04488101_103316 | Not Available | Positive | 2335814 - 2337124 | 48135.0 |
| dtdp-glucose 4,6-dehydratase | SAMN04488101_103317 | Not Available | Positive | 2337124 - 2338113 | 37359.9 |
| udp-glucose 4-epimerase | SAMN04488101_103318 | Not Available | Positive | 2338121 - 2339143 | 37375.3 |
| hypothetical protein | SAMN04488101_103319 | Not Available | Positive | 2339144 - 2339710 | 21859.8 |
| dtdp-glucose 4,6-dehydratase | SAMN04488101_103320 | Not Available | Positive | 2339739 - 2340791 | 39664.3 |
| putative abc transport system permease protein | SAMN04488101_103321 | Not Available | Negative | 2340801 - 2342033 | 44140.6 |
| iron-sulfur cluster assembly protein | SAMN04488101_103322 | Not Available | Negative | 2342124 - 2342477 | 12793.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
