Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN04488101_103303 | Not Available | Negative | 2319995 - 2322442 | 92833.2 |
| carboxypepd_reg-like domain-containing protein | SAMN04488101_103304 | Not Available | Positive | 2322685 - 2325219 | 96059.8 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04488101_103305 | Not Available | Positive | 2325289 - 2326476 | 43453.4 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04488101_103306 | Not Available | Positive | 2326579 - 2327616 | 39167.6 |
| hypothetical protein | SAMN04488101_103307 | Not Available | Positive | 2327616 - 2328032 | 14723.8 |
| transcriptional regulator, tetr family | SAMN04488101_103308 | Not Available | Positive | 2328032 - 2328607 | 22275.9 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN04488101_103309 | Not Available | Positive | 2328989 - 2330443 | 54809.7 |
| hypothetical protein | SAMN04488101_103310 | Not Available | Positive | 2330457 - 2330861 | 15243.4 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04488101_103311 | Not Available | Positive | 2331036 - 2331545 | 19284.9 |
| hypothetical protein | SAMN04488101_103312 | Not Available | Positive | 2331572 - 2332537 | 36486.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
