Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN04488101_103293 | Not Available | Positive | 2303076 - 2304020 | 35441.3 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN04488101_103294 | Not Available | Positive | 2304059 - 2304784 | 27157.0 |
| alpha/beta hydrolase family protein | SAMN04488101_103295 | Not Available | Negative | 2304908 - 2305657 | 27917.6 |
| beta-glucosidase | SAMN04488101_103296 | Not Available | Negative | 2305999 - 2308299 | 83856.9 |
| hypothetical protein | SAMN04488101_103297 | Not Available | Negative | 2308332 - 2309699 | 51731.1 |
| starch-binding associating with outer membrane | SAMN04488101_103298 | Not Available | Negative | 2309760 - 2311247 | 54707.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_103299 | Not Available | Negative | 2311259 - 2314324 | 110131.0 |
| y_y_y domain-containing protein | SAMN04488101_103300 | Not Available | Negative | 2314581 - 2317472 | 111175.0 |
| upf0176 protein | SAMN04488101_103301 | Not Available | Negative | 2317488 - 2318426 | 35135.7 |
| bleomycin hydrolase | SAMN04488101_103302 | Not Available | Positive | 2318749 - 2319936 | 43846.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
