Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN04488101_103263 | Not Available | Negative | 2269447 - 2269851 | 15552.1 |
| polyisoprenoid-binding protein ycei | SAMN04488101_103264 | Not Available | Negative | 2270009 - 2270602 | 21072.6 |
| glycine dehydrogenase | SAMN04488101_103265 | Not Available | Negative | 2270695 - 2273571 | 104786.0 |
| hypothetical protein | SAMN04488101_103266 | Not Available | Negative | 2273663 - 2274226 | 21361.0 |
| pyridoxine 5'-phosphate synthase | SAMN04488101_103267 | Not Available | Negative | 2274246 - 2274965 | 26591.8 |
| small-conductance mechanosensitive channel | SAMN04488101_103268 | Not Available | Positive | 2274990 - 2276585 | 59242.9 |
| adenosylhomocysteinase | SAMN04488101_103269 | Not Available | Negative | 2276657 - 2277973 | 48309.9 |
| putative bacilliredoxin, yphp/yqiw family | SAMN04488101_103270 | Not Available | Positive | 2278205 - 2278615 | 14834.9 |
| signal transduction histidine kinase | SAMN04488101_103271 | Not Available | Negative | 2278865 - 2281228 | 88375.5 |
| tigr00159 family protein | SAMN04488101_103272 | Not Available | Negative | 2281331 - 2282122 | 29698.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
