Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_103243 | Not Available | Positive | 2248829 - 2249479 | 25271.8 |
| Trna-asn | Not Available | Not Available | Positive | 2249524 - 2249600 | Not Available |
| sugar or nucleoside kinase, ribokinase family | SAMN04488101_103245 | Not Available | Positive | 2249742 - 2250662 | 33779.7 |
| predicted heme/steroid binding protein | SAMN04488101_103246 | Not Available | Negative | 2250718 - 2250957 | 9262.94 |
| hypothetical protein | SAMN04488101_103247 | Not Available | Negative | 2250950 - 2251630 | 26084.1 |
| hypothetical protein | SAMN04488101_103248 | Not Available | Positive | 2251700 - 2252602 | 33839.8 |
| nadph:quinone reductase | SAMN04488101_103249 | Not Available | Positive | 2252731 - 2253744 | 35868.8 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488101_103250 | Not Available | Negative | 2253741 - 2254631 | 35207.0 |
| protein of unknown function | SAMN04488101_103251 | Not Available | Negative | 2254641 - 2255444 | 29940.9 |
| tonb-dependent receptor plug domain | SAMN04488101_103252 | Not Available | Negative | 2255505 - 2258150 | 98130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
