Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_103233 | Not Available | Negative | 2235340 - 2236635 | 48950.7 |
| hypothetical protein | SAMN04488101_103234 | Not Available | Negative | 2236655 - 2238517 | 69596.6 |
| hypothetical protein | SAMN04488101_103235 | Not Available | Negative | 2238543 - 2239217 | 25028.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_103236 | Not Available | Positive | 2239488 - 2240090 | 22979.2 |
| fecr family protein | SAMN04488101_103237 | Not Available | Positive | 2240176 - 2241369 | 44809.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_103238 | Not Available | Positive | 2241470 - 2244832 | 124393.0 |
| susd family protein | SAMN04488101_103239 | Not Available | Positive | 2244845 - 2246569 | 64361.1 |
| predicted amidohydrolase | SAMN04488101_103240 | Not Available | Negative | 2246654 - 2247598 | 34927.0 |
| Trna-asn | Not Available | Not Available | Positive | 2247826 - 2247902 | Not Available |
| chrd domain-containing protein | SAMN04488101_103242 | Not Available | Negative | 2248166 - 2248750 | 20717.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
