Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN04488101_103223 | Not Available | Negative | 2226275 - 2227615 | 49526.0 |
| transcriptional regulator, tetr family | SAMN04488101_103224 | Not Available | Negative | 2227630 - 2228235 | 23190.3 |
| transcriptional regulator, tetr family | SAMN04488101_103225 | Not Available | Negative | 2228347 - 2228985 | 24659.9 |
| udp-n-acetylmuramate dehydrogenase | SAMN04488101_103226 | Not Available | Positive | 2229109 - 2230125 | 36790.9 |
| hypothetical protein | SAMN04488101_103227 | Not Available | Negative | 2230067 - 2230210 | 5665.06 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_103228 | Not Available | Positive | 2230292 - 2230822 | 20297.4 |
| pap2 superfamily protein | SAMN04488101_103229 | Not Available | Positive | 2230966 - 2231742 | 28975.9 |
| phosphoglycerol transferase mdob | SAMN04488101_103230 | Not Available | Positive | 2231754 - 2233685 | 73516.8 |
| erythromycin esterase | SAMN04488101_103231 | Not Available | Negative | 2233766 - 2234710 | 36234.4 |
| peptide-methionine (s)-s-oxide reductase | SAMN04488101_103232 | Not Available | Positive | 2234841 - 2235332 | 18455.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
