Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_103213 | Not Available | Negative | 2209135 - 2210040 | 33229.3 |
| deoxyribodipyrimidine photo-lyase | SAMN04488101_103214 | Not Available | Positive | 2210289 - 2211581 | 48692.2 |
| merr hth family regulatory protein | SAMN04488101_103215 | Not Available | Positive | 2211703 - 2212494 | 29886.8 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN04488101_103216 | Not Available | Positive | 2212560 - 2215355 | 105377.0 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN04488101_103217 | Not Available | Positive | 2215376 - 2216602 | 43123.2 |
| peptidase family m1 | SAMN04488101_103218 | Not Available | Negative | 2216742 - 2218400 | 63300.1 |
| hypothetical protein | SAMN04488101_103219 | Not Available | Negative | 2218403 - 2220280 | 71205.3 |
| dihydrolipoamide dehydrogenase | SAMN04488101_103220 | Not Available | Positive | 2220423 - 2221826 | 50081.8 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488101_103221 | Not Available | Negative | 2221947 - 2225147 | 116520.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488101_103222 | Not Available | Negative | 2225208 - 2226275 | 38242.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
