Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN04488101_103203 | Not Available | Positive | 2197162 - 2198907 | 62839.6 |
| ompa-ompf porin, oop family | SAMN04488101_103204 | Not Available | Positive | 2199029 - 2200357 | 47326.2 |
| dna-binding transcriptional regulator, marr family | SAMN04488101_103205 | Not Available | Positive | 2200491 - 2200949 | 17153.8 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN04488101_103206 | Not Available | Positive | 2200927 - 2203290 | 87397.6 |
| acetyl-coa acyltransferase | SAMN04488101_103207 | Not Available | Positive | 2203314 - 2204492 | 41878.7 |
| acyl-coa dehydrogenase | SAMN04488101_103208 | Not Available | Positive | 2204506 - 2206296 | 65615.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN04488101_103209 | Not Available | Positive | 2206422 - 2206913 | 17878.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN04488101_103210 | Not Available | Positive | 2206910 - 2207815 | 32932.5 |
| fad binding domain of dna photolyase | SAMN04488101_103211 | Not Available | Negative | 2207819 - 2208328 | 19996.0 |
| fad binding domain of dna photolyase | SAMN04488101_103212 | Not Available | Negative | 2208341 - 2209123 | 30409.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
