Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_103183 | Not Available | Positive | 2157345 - 2157533 | 7239.6 |
| hypothetical protein | SAMN04488101_103184 | Not Available | Positive | 2157784 - 2158269 | 18099.2 |
| badf-type atpase | SAMN04488101_103185 | Not Available | Negative | 2158305 - 2159159 | 31920.0 |
| outer membrane protein tolc | SAMN04488101_103186 | Not Available | Negative | 2159178 - 2160518 | 49740.4 |
| multidrug efflux pump | SAMN04488101_103187 | Not Available | Negative | 2160505 - 2163609 | 113688.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488101_103188 | Not Available | Negative | 2163606 - 2164694 | 38835.2 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN04488101_103189 | Not Available | Positive | 2165011 - 2166792 | 66094.0 |
| hypothetical protein | SAMN04488101_103190 | Not Available | Negative | 2167278 - 2167760 | 17151.6 |
| peroxiredoxin | SAMN04488101_103191 | Not Available | Negative | 2167844 - 2168986 | 42297.0 |
| starch-binding associating with outer membrane | SAMN04488101_103192 | Not Available | Negative | 2169026 - 2170621 | 59955.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
