Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_103170 | Not Available | Negative | 2132094 - 2132405 | 11318.8 |
| transcriptional regulator, badm/rrf2 family | SAMN04488101_103171 | Not Available | Positive | 2132626 - 2133063 | 16227.9 |
| group ii intron reverse transcriptase/maturase | SAMN04488101_103174 | Not Available | Positive | 2133649 - 2134995 | 51783.1 |
| subtilase family protein | SAMN04488101_103176 | Not Available | Positive | 2135150 - 2136745 | 58069.4 |
| nacht domain-containing protein | SAMN04488101_103177 | Not Available | Negative | 2136811 - 2139354 | 99901.5 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488101_103178 | Not Available | Positive | 2139608 - 2149399 | 334989.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488101_103179 | Not Available | Positive | 2149416 - 2150429 | 36170.2 |
| wd40-like beta propeller repeat | SAMN04488101_103180 | Not Available | Positive | 2150466 - 2152469 | 75006.8 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488101_103181 | Not Available | Positive | 2152625 - 2156224 | 128743.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488101_103182 | Not Available | Negative | 2156243 - 2157253 | 37143.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
