Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase (b12-dependent) | SAMN04488101_103149 | Not Available | Negative | 2106757 - 2110416 | 135139.0 |
| hypothetical protein | SAMN04488101_103151 | Not Available | Negative | 2110805 - 2111461 | 24805.6 |
| hypothetical protein | SAMN04488101_103152 | Not Available | Negative | 2111653 - 2112402 | 27183.9 |
| hypothetical protein | SAMN04488101_103153 | Not Available | Negative | 2112452 - 2113024 | 23080.9 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN04488101_103154 | Not Available | Negative | 2113040 - 2113849 | 29080.2 |
| carboxyl-terminal processing protease | SAMN04488101_103155 | Not Available | Positive | 2113992 - 2115572 | 58740.5 |
| gtp-binding protein | SAMN04488101_103156 | Not Available | Negative | 2115580 - 2116881 | 49099.4 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_103157 | Not Available | Negative | 2117022 - 2117528 | 18980.2 |
| gtp-binding protein era | SAMN04488101_103158 | Not Available | Negative | 2117574 - 2118449 | 33392.3 |
| Trna-met | Not Available | Not Available | Positive | 2118561 - 2118636 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
