Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN04488101_103129 | Not Available | Negative | 2089318 - 2090256 | 33566.9 |
| large subunit ribosomal protein l32 | SAMN04488101_103130 | Not Available | Negative | 2090356 - 2090547 | 7136.55 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN04488101_103131 | Not Available | Negative | 2090569 - 2091126 | 21126.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN04488101_103132 | Not Available | Negative | 2091162 - 2092241 | 39120.0 |
| dimethyladenosine transferase | SAMN04488101_103133 | Not Available | Positive | 2092341 - 2093123 | 29802.2 |
| d-3-phosphoglycerate dehydrogenase | SAMN04488101_103134 | Not Available | Positive | 2093139 - 2094065 | 34421.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488101_103135 | Not Available | Positive | 2094152 - 2095087 | 36877.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04488101_103136 | Not Available | Positive | 2095092 - 2095613 | 19865.7 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488101_103137 | Not Available | Positive | 2095626 - 2096918 | 48911.6 |
| transcription elongation factor grea | SAMN04488101_103138 | Not Available | Positive | 2097266 - 2097739 | 17211.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
