Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10369 | Not Available | Positive | 2009220 - 2012453 | 119130.0 |
| starch-binding associating with outer membrane | SAMN04488101_10370 | Not Available | Positive | 2012470 - 2013912 | 53215.3 |
| sialidase-1 | SAMN04488101_10371 | Not Available | Positive | 2013945 - 2015123 | 42427.0 |
| sialidase-1 | SAMN04488101_10372 | Not Available | Positive | 2015127 - 2016776 | 60212.3 |
| n-acetylneuraminate lyase | SAMN04488101_10373 | Not Available | Positive | 2016854 - 2017786 | 33868.3 |
| pkd repeat-containing protein | SAMN04488101_10374 | Not Available | Positive | 2017862 - 2019340 | 53328.5 |
| n-acetylneuraminic acid mutarotase | SAMN04488101_10375 | Not Available | Positive | 2019340 - 2020413 | 37693.3 |
| predicted arabinose efflux permease, mfs family | SAMN04488101_10376 | Not Available | Positive | 2020421 - 2021653 | 45428.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_10377 | Not Available | Positive | 2021764 - 2022357 | 23304.4 |
| fecr family protein | SAMN04488101_10378 | Not Available | Positive | 2022425 - 2023408 | 37437.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
